Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890515.1_cds_XP_016445234.1_40213
CDS Infomation

[gene=LOC107770439] [db_xref=GeneID:107770439] [protein=26S protease regulatory subunit 6B homolog] [protein_id=XP_016445234.1] [location=complement(join(39334..39468,39719..39802,40001..40153,40252..40410,44992..45222,46849..47328))] [gbkey=CDS]
Sequence

ATGGCTTCCCCTATGGTCCTCGACCCAACACCCTTACCCAAACCCCCTTCAACCCGACCC
GAACCCTCCATCCCTTCCTACCCCTCCGACGGCGAAGACGACCTCTACGCTCGTCTCAAA
TCTCTTCAACGCCAACTCGAATTCATCGAGATCCAAGAAGAATACGTTAAAGACGAGCTC
AAAAATCTCCGCCGCGAACACTTACGTGCGCAGGAAGAAGTTAAACGGATCCAATCGGTG
CCGTTAGTGATCGGCCAGTTCATGGAGATGATTGATACGAATAACGCTATTGTAGGGTCC
ACTACGGGGTCGAATTACTATGTTAGGATATTAAGTACCATTAATCGCGAGCTGCTTAAG
CCTTCGGCTTCTGTCGCTTTGCACCGCCATTCGAATGCGCTCGTTGATGTTTTGCCGCCT
GAAGCTGACTCGAGTATTTCGTTGCTTAGTCAATCGGAGAAGCCTGATGTTACGTACAAT
GATATTGGAGGATGTGACATACAAAAGCAGGAAATCCGTGAAGCTGTTGAGCTACCTCTG
ACTCATCATGACTTGTACAAGCAGATTGGTATAGATCCTCCCCGTGGTGTCTTGCTCTAC
GGTCCACCTGGCACTGGGAAAACTATGCTTGCAAAGGCTGTAGCACATCATACTACCGCG
GCTTTCATAAGGGTTGTTGGCTCAGAATTTGTTCAGAAGTACTTGGGTGAGGGCCCACGA
ATGGTTCGTGATGTCTTTCGCCTTGCCAAAGAAAATGCTCCAGCAATCATATTTATTGAT
GAGGTTGATGCAATTGCTACTGCTAGGTTCGATGCTCAGACTGGAGCTGATAGAGAGGTC
CAGCGTATCCTCATGGAGCTACTAAATCAGATGGATGGGTTTGACCAAACGGTGAATGTG
AAAGTTATTATGGCAACTAATAGAGCTGACACACTGGACCCTGCACTTTTACGTCCTGGA
AGGCTTGATCGGAAGATCGAATTTCCTTTGCCTGATAGACGTCAAAAGAGGCTCGTTTTT
CAGGTATGCACTGCTAAGATGAACTTAGGTGATGAGGTTGACTTGGAAGATTATGTTTCT
CGCCCTGATAAAATCAGTGCTGCTGAGATTTCGGCCATCTGTCAAGAAGCTGGTATGCAT
GCAGTGCGCAAGAATCGATATGTCATACTTCCCAAGGACTTCGAAAAGGGTTACAGGACC
AACGTTAAGAAGCCTGACACTGACTTTGAATTCTACAAGTGA

Peptide Sequence

PEP ID

XP_016445234.1
PEP Infomation

PREDICTED: 26S protease regulatory subunit 6B homolog [Nicotiana tabacum]
Sequence

MASPMVLDPTPLPKPPSTRPEPSIPSYPSDGEDDLYARLKSLQRQLEFIEIQEEYVKDEL
KNLRREHLRAQEEVKRIQSVPLVIGQFMEMIDTNNAIVGSTTGSNYYVRILSTINRELLK
PSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPL
THHDLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPR
MVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTGADREVQRILMELLNQMDGFDQTVNV
KVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVS
RPDKISAAEISAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKKPDTDFEFYK

Transcript Sequence

Gene sequence data has not been registered.